ARLEQUIN
浣跨敤璇存槑
寮?/p>
瑷�
Arlequin
鏄竴娆句紭绉�鐨勪汉绫婚仐浼犲鏁版嵁鍒嗘瀽杞欢锛屽叾鍚嶅瓧鏉ユ簮浜庢硶璇?/p>
鈥?/p>
Arlecchino
鈥?/p>
锛屾槸涓�涓崄涓冧笘
绾剰澶у埄钁楀悕鍠滃墽浜虹墿鐨勫悕瀛椼�傝繖涓枩鍓т汉鐗╁叿鏈夊涓潰鐩紝鍙互鏍规嵁闇�瑕侊紝澶氫釜瑙掕壊涔嬮棿杞昏�屾槗涓?/p>
鐨勭浉浜掕浆鍙樸�?/p>
Arlequin
杞欢鍖呭姝ゅ彇鍚嶏紝澶ф鏄负浜嗚鏄庢娆捐蒋浠惰兘澶熸弧瓒抽仐浼犲垎鏋愭柟闈㈢殑闇�姹傘�?/p>
Arlequin
杞欢鍖呮彁渚涗簡璁稿鏂规硶鍜岀粺璁″妫�楠屾潵浠庨仐浼犲鍜屼汉鍙ｇ粺璁″鏁版嵁锛堝澶ч噺鐨勫垎瀛愬簭鍒楁暟鎹?/p>
鍜屼紶缁熺殑绛変綅鍩哄洜棰戠巼绛夛級涓寲鎺樹俊鎭�?/p>
Arlequin
杞欢鏈夌潃鍙嬪ソ鐨?/p>
Java
鍥惧舰鎿嶄綔鐣岄潰锛屼究浜庝娇鐢ㄨ�呮搷
浣溿�?/p>
Arlequin
杞欢鍖呯敱
Stefan Schneider
銆?/p>
David Roessil
鍜?/p>
Laurent Excoffier
涓変汉瀹屾垚銆?/p>
Arlequin
杞欢鍖?/p>
涓嬭浇鍜屽崌绾х殑缃戝潃涓猴細
http://anthro.unige.ch/arlequin
銆?/p>
涓嬭浇鍚庣殑
Arlequin
杞欢鍖呭熀鏈敱
Arlequin20_zip.exe
鍜?/p>
jre117-win32.exe
缁勬垚锛?/p>
鍦ㄨ繍琛?/p>
Arlequin
绋嬪簭涔嬪墠锛?/p>
闇�瑕佸厛瀹夎
jre117-win32.exe
銆?/p>
Arlequin20_zip.exe
鏄釜鑷В鍘嬬殑绋嬪簭锛岀偣鍑绘绋嬪簭灏嗘枃浠堕噴鏀惧埌鎵�閫夋嫨鐨勭洰褰曪紝灏卞彲浠ヨ繍琛屼簡銆傚湪涓婅堪缃戝潃杩樻彁渚涗簡涓�
涓崌绾у寘
arlpatch2001.zip
锛屼慨姝ｄ簡鍘熻蒋浠堕噷杈圭殑涓�浜?/p>
bug
锛屽苟鎻愰珮浜嗘煇浜涜绠楃▼搴忕殑绮剧‘鎬э紱涓嬭浇鍚?/p>
瑙ｅ帇锛岀洿鎺ヨ繍琛屽嵆鍙�?/p>
Arlquin
鍔熻兘姒傝堪锛?/p>
飩?/p>
Molecular diversity
锛堝垎瀛愬鎬佹�э級
飩?/p>
Mismatch distribution
锛堥敊閰嶅垎甯冿級
飩?/p>
Haplotype frequency estimation
锛堝崟鍊嶅瀷棰戠巼浼拌锛?/p>
飩?/p>
Linkage disequilibrium
锛堣繛閿佷笉骞宠 锛?/p>
锛氭娴嬩笉鍚屼綅鐐逛笂绛変綅鍩哄洜鐨勯潪闅忔満鍏宠仈
飩?/p>
Hardy-Weinberg equilibrium
锛堝搱娓?/p>
鈥?/p>
浼牸骞宠 锛?/p>
飩?/p>
Tajima`s neutrality test
锛?/p>
Tajima
涓�ф楠岋級
飩?/p>
Fu`s neutrality test
锛?/p>
Fu
涓�ф楠岋級
飩?/p>
Ewens-watterson neutrality test
锛?/p>
Ewens-watterson
涓�ф楠岋級
飩?/p>
浠ヤ笂涓変釜涓�ф楠岄兘鏄熀浜庢棤闄愪綅鐐规ā鍨嬶紝閫傜敤浜?/p>
DNA sequence
鍜?/p>
RFLP
鍗曞�嶅瀷銆?/p>
飩?/p>
Chakraborty`s amalgamation test (Chakraborty`s
铻嶅悎妫�楠岋紝
妫�娴嬩汉缇ょ殑鍧囦竴鎬ф垨鍚岃川鎬э紝
鍜屼腑鎬ч�夋嫨绛?/p>
)
飩?/p>
Minimu Spanning Network
锛?/p>
MSN
锛屾渶灏忔墿寮犳爲鎴栫О涔嬩负鏈�灏忔敮鎾戞爲锛屽熀浜庡垎瀛愬樊寮傦級
飩?/p>
AMOV
A
锛堝垎瀛愬樊寮傚害鍒嗘瀽锛岀敤浠ヨ瘎娴嬩汉缇ょ殑閬椾紶缁撴瀯锛?/p>
飩?/p>
Pairwise genetic distances (
閬椾紶璺濈鐨勪及璁?/p>
)
飩?/p>
Exact test of population differentiation (
妫�娴嬮殢鏈轰氦閰嶇兢浣撳崟鍊嶅瀷鐨勯潪闅忔満鍒嗗竷
)
飩?/p>
Assignment test of genotype
(
閫氳繃浼拌绛変綅鍩哄洜棰戠巼灏嗗崟涓熀鍥犲瀷鍒嗛厤鍒扮壒瀹氱殑浜虹兢
涓?/p>
)
Arlequin
杞欢鍖呭姛鑳藉己澶э紝浠ヤ笂鍒楀嚭浜嗘湰杞欢鍖呬竴浜涘熀鏈殑鍔熻兘锛屼笅鏂囧皢瀵硅繖浜涘姛鑳借繘琛岃缁嗙殑
闃愰噴鍜屽疄渚嬭瑙ｃ�?/p>
Arlequin
杈撳叆鏁版嵁鐨勬牸寮?/p>
Arlequin
杞欢鍖呭ぇ鑷磋兘鎺ュ彈浠ヤ笅浜旂鏁版嵁鏍煎紡锛?/p>
DNA sequences
銆?/p>
RFLP data
銆?/p>
Microsatellite data
銆?/p>
Standard data
銆?/p>
Allele frequency data
銆傝繖浜涙暟鎹彲浠ヤ娇鍗曞�嶅瀷锛?/p>
haplotypic
锛夋暟鎹牸寮忥紝涔熷彲浠ユ槸鍩哄洜鍨?/p>
锛?/p>
genotypic
锛夋暟鎹牸寮忋�傚浜?/p>
RFLP
data
绫诲瀷鏁版嵁锛?/p>
鈥?/p>
1
鈥濊〃绀哄瓨鍦ㄩ檺鍒舵�т綅鐐癸紝
鈥?/p>
0
鈥濊〃绀轰笉瀛樺湪闄愬埗
鎬т綅鐐癸紝
鈥?/p>
-
鈥濊〃绀洪檺鍒舵�т綅鐐圭己澶便�傚浜?/p>
DNA
sequences
绫诲瀷鏁版嵁锛?/p>
鈥?/p>
-
鈥?/p>
浠ｈ〃涓�涓己澶辩殑鏍歌嫹閰革紝
鈥?/p>
锛?/p>
鈥?/p>
浠ｈ〃涓�涓湭鐭ユ牳鑻烽吀锛?/p>
R
琛ㄧず
A/G
锛?/p>
purine
锛?/p>
锛?/p>
Y
琛ㄧず
C/T
锛?/p>
pyrimidine
锛?/p>
锛?/p>
M
琛ㄧず
A/C
锛?/p>
W
琛ㄧず
A/T
锛?/p>
S
琛ㄧず
C/G
锛?/p>
K
琛ㄧず
G/T
锛?/p>
B
琛ㄧず
C/G/T
锛?/p>
D
琛ㄧず
A/G/T
锛?/p>
H
琛ㄧず
A/C/T
锛?/p>
V
琛ㄧず
A/C/G
锛?/p>
N
琛ㄧず
A/C/G/T
銆?/p>
Arlequin
杞欢鍖呰緭鍏ユ枃浠剁殑鎵╁睍鍚嶅簲璇ヤ负
*.arp
锛岄厤缃枃浠剁殑鎵╁睍鍚嶄负
*.ars
銆傚湪
Arlequin
杞欢鍖呰緭